The detailed information of tRNA gene sequence


Sequence ID>WENV180092102
Genome IDMPMF02239777
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 5151
End posion on genome 5075
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aataaatgaa
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCAGTCGGCTCATAACCGAAAGGTCCCAGGTTCAAG
TCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
gcttttaaaa
Secondary structure (Cloverleaf model)
>WENV180092102	Ile2	CAT
                   a      ACCA gcttttaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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