The detailed information of tRNA gene sequence


Sequence ID>WENV180092105
Genome IDMPMF02240179
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 350
End posion on genome 276
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtcacaagac
tRNA gene sequence 
GGGCGCGTAGCTCAGTGGTAGAGCACTCGTTTCACATGCGAGGGGTCGCTGGTTCAAATC
CAGCCGCGCCCACCA
Downstream region at tRNA end position 
ttctccaact
Secondary structure (Cloverleaf model)
>WENV180092105	Val	CAC
                   c      ACCA ttctccaact
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C G A C C     A
        G A        A      | | | | |     A
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T + G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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