The detailed information of tRNA gene sequence


Sequence ID>WENV180092118
Genome IDMPMF02241010
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1494
End posion on genome 1405
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggcccgctc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATAGGTTAACGCCTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ctttttctaa
Secondary structure (Cloverleaf model)
>WENV180092118	Ser	GCT
                   c      GCCA ctttttctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATAGGTTAACGCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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