The detailed information of tRNA gene sequence


Sequence ID>WENV180092140
Genome IDMPMF02242571
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 113363
End posion on genome 113438
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaacggcgc
tRNA gene sequence 
AGGAGTGTAGCTCAGCTGGCAGAGCGGCGGTCTCCAAAACCGTAGGTCGGGGGTTCGAAT
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
ttaccgccgg
Secondary structure (Cloverleaf model)
>WENV180092140	Trp	CCA
                   c      GCCA ttaccgccgg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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