The detailed information of tRNA gene sequence


Sequence ID>WENV180092147
Genome IDMPMF02242832
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 542
End posion on genome 467
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
catcgcaagt
tRNA gene sequence 
GGGGCTGTAGCTCACTCGGGAGAGCGCTTCAATGGCATTGAAGAGGTAGCGGGTTCGAGT
CCCGCCAGCTCCACCA
Downstream region at tRNA end position 
agccggactg
Secondary structure (Cloverleaf model)
>WENV180092147	Ala	GGC
                   t      ACCA agccggactg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C G C C C     A
      T C A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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