The detailed information of tRNA gene sequence


Sequence ID>WENV180092149
Genome IDMPMF02242974
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 331
End posion on genome 420
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccgcaagcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACCGTA
CCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
tatctgtgcc
Secondary structure (Cloverleaf model)
>WENV180092149	Ser	GCT
                   c      GCCA tatctgtgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGAAACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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