The detailed information of tRNA gene sequence


Sequence ID>WENV180092170
Genome IDMPMF02244100
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 6749
End posion on genome 6657
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccctgatttc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTGTAGCC
TCATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatctttttt
Secondary structure (Cloverleaf model)
>WENV180092170	Ser	GCT
                   c      GCCA gatctttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTGTAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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