The detailed information of tRNA gene sequence


Sequence ID>WENV180092183
Genome IDMPMF02244746
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4395
End posion on genome 4319
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gacaaaacat
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGAAGGTTCGAG
TCCTCCCGGGCCCACCA
Downstream region at tRNA end position 
ccatcggtac
Secondary structure (Cloverleaf model)
>WENV180092183	Ile2	CAT
                   t      ACCA ccatcggtac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      |   | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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