The detailed information of tRNA gene sequence


Sequence ID>WENV180092192
Genome IDMPMF02245494
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 643
End posion on genome 567
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cccgcctcgg
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCCGGCCGCTCATAACGGTCTGGTCGCTGGTTCGAG
TCCAGCCGGGCCCACCA
Downstream region at tRNA end position 
ctaccttaat
Secondary structure (Cloverleaf model)
>WENV180092192	Ile2	CAT
                   g      ACCA ctaccttaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTC
                    G - C
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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