The detailed information of tRNA gene sequence


Sequence ID>WENV180092207
Genome IDMPMF02246648
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 72
End posion on genome 159
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaagtatg
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTAGGCTTATACCCT
ACTGAGGGTTCGAATCCATCCCTCTCCGttt
Downstream region at tRNA end position 
aaattaaaaa
Secondary structure (Cloverleaf model)
>WENV180092207	Ser	GGA
                   g      Gttt aaattaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
      C G A        G      | |   | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTAGGCTTATACCCTACT
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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