The detailed information of tRNA gene sequence


Sequence ID>WENV180092239
Genome IDMPMF02248372
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 142
End posion on genome 215
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cggtctagtt
tRNA gene sequence 
GCCACCTTAGCTCAATTGGCAGAGCAAGCGCTTCGTAAGTGCTAGGTTCGGGGTTCAAAT
CCCCGAGGTGGCTCta
Downstream region at tRNA end position 
tatagcttac
Secondary structure (Cloverleaf model)
>WENV180092239	Thr	CGT
                   t      TCta tatagcttac
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T A
                    T     G C C C C     A
      T A A        A      | | | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    G - C
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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