The detailed information of tRNA gene sequence


Sequence ID>WENV180092253
Genome IDMPMF02249631
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1771
End posion on genome 1847
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatctctgg
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCACCGGAATCATAATCCGGGTGTCGGCGGTTCGAG
TCCGCCCTCCGCTACCA
Downstream region at tRNA end position 
aacaaaatca
Secondary structure (Cloverleaf model)
>WENV180092253	Met	CAT
                   g      ACCA aacaaaatca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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