The detailed information of tRNA gene sequence


Sequence ID>WENV180092266
Genome IDMPMF02250453
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 6428
End posion on genome 6517
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atattgacgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCCTGCTAAGCGTGTGAATGGGTGACTGTT
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttttctgcc
Secondary structure (Cloverleaf model)
>WENV180092266	Ser	GCT
                   c      GCCA tttttctgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGAATGGGTGACTGTTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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