The detailed information of tRNA gene sequence


Sequence ID>WENV180092267
Genome IDMPMF02250652
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 571
End posion on genome 663
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaggctat
tRNA gene sequence 
GGAAGCGTGGGTGAGCTGGTTGAAACCAACGGTTTGCTAAATCGTCAAAGGTGGAAACAT
CTTTCAAGAGTTCGAATCTCTTCGCTTCCGCCA
Downstream region at tRNA end position 
tgatttaann
Secondary structure (Cloverleaf model)
>WENV180092267	Ser	GCT
                   t      GCCA tgatttaann
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T T C T C     A
    T C G A        G      | | | | |     G
  G         G T G G       A A G A G     C
  G           | | |                 T T
  T         A A C C
    T G A          A     CAAAGGTGGAAACATCTTTC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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