The detailed information of tRNA gene sequence


Sequence ID>WENV180092299
Genome IDMPMF02252454
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 7192
End posion on genome 7266
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttcaattgat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACTGGTTCGAA
TCCGGTCCCCGCTACaa
Downstream region at tRNA end position 
taaaaacccc
Secondary structure (Cloverleaf model)
>WENV180092299	fMet	CAT
                   t      ACaa taaaaacccc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
      T G A        G      | | + | |     G
    C       C G A G       A C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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