The detailed information of tRNA gene sequence


Sequence ID>WENV180092330
Genome IDMPMF02254478
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 144
End posion on genome 231
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctgctcggc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGACGATTGCGACGGTCTTGAAAACCGTTGAGCCTCACGGCTCC
GGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
gcacagtctt
Secondary structure (Cloverleaf model)
>WENV180092330	Ser	TGA
                   c      GCCA gcacagtctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGAGCCTCACGGCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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