The detailed information of tRNA gene sequence


Sequence ID>WENV180092344
Genome IDMPMF02255307
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 208
End posion on genome 132
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
acttaactaa
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTACACTCATAATGTATTGGTCCCAGGTTCGAA
TCCTGGCGGGCCCACCA
Downstream region at tRNA end position 
attattctga
Secondary structure (Cloverleaf model)
>WENV180092344	Ile2	CAT
                   a      ACCA attattctga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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