The detailed information of tRNA gene sequence


Sequence ID>WENV180092371
Genome IDMPMF02257429
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 342
End posion on genome 431
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgcaaacgcc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGTCCGTTTGCTCGGA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aataatatac
Secondary structure (Cloverleaf model)
>WENV180092371	Ser	TGA
                   c      GCCA aataatatac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCGTTTGCTCGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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