The detailed information of tRNA gene sequence


Sequence ID>WENV180092407
Genome IDMPMF02259066
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2049
End posion on genome 2123
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gaatgcccat
tRNA gene sequence 
GGGCCGGTAGCTCAGTGGTCAGAGCAGGCGACTCATAATCGCTCGGTCGCGGGTTCGATC
CCCGCCCGGCCCACCg
Downstream region at tRNA end position 
caataatgca
Secondary structure (Cloverleaf model)
>WENV180092407	Ile2	CAT
                   t      ACCg caataatgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          C T
                    T     C G C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     CGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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