The detailed information of tRNA gene sequence


Sequence ID>WENV180092424
Genome IDMPMF02260031
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 15626
End posion on genome 15551
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgttttcgt
tRNA gene sequence 
AGGCCAGTAGCTCAACTGGCAGAGCACCGGTCTCCAAAACCGGGGGCTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cccacgacga
Secondary structure (Cloverleaf model)
>WENV180092424	Trp	CCA
                   t      GCCA cccacgacga
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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