The detailed information of tRNA gene sequence


Sequence ID>WENV180092455
Genome IDMPMF02261398
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 135
End posion on genome 60
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgcgcgttt
tRNA gene sequence 
AGGGGCATAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGCGGGTTCGAAC
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
tcttccggcg
Secondary structure (Cloverleaf model)
>WENV180092455	Trp	CCA
                   t      GCCA tcttccggcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          C A
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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