The detailed information of tRNA gene sequence


Sequence ID>WENV180092489
Genome IDMPMF02262946
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1427
End posion on genome 1353
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cagagaggcc
tRNA gene sequence 
GTGCTGGTGCCAGAGTGGTTTAATGGGGTGGATTGCAAATCCATTGTTCGTGAGTTCGAA
TCTCACCCAGCACTCaa
Downstream region at tRNA end position 
agtaatgaaa
Secondary structure (Cloverleaf model)
>WENV180092489	Cys	GCA
                   c      TCaa agtaatgaaa
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G A G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TGTTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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