The detailed information of tRNA gene sequence


Sequence ID>WENV180092513
Genome IDMPMF02264163
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 221
End posion on genome 147
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgatattcag
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACtt
Downstream region at tRNA end position 
tggaaaatga
Secondary structure (Cloverleaf model)
>WENV180092513	fMet	CAT
                   g      ACtt tggaaaatga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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