The detailed information of tRNA gene sequence


Sequence ID>WENV180092533
Genome IDMPMF02265001
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 172
End posion on genome 82
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgcccgcgc
tRNA gene sequence 
GGAGGGGTCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGCGCTTACCTGGGTAAACCGG
GTCGAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
ccctgaaatc
Secondary structure (Cloverleaf model)
>WENV180092533	Ser	GCT
                   c      GCCA ccctgaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TACCTGGGTAAACCGGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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