The detailed information of tRNA gene sequence


Sequence ID>WENV180092569
Genome IDMPMF02267458
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3383
End posion on genome 3459
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgaaacctgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGGGGTTCAAA
TCCCCCCCCCGCAACCA
Downstream region at tRNA end position 
acctgtttgt
Secondary structure (Cloverleaf model)
>WENV180092569	fMet	CAT
                   t      ACCA acctgtttgt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     A
    C       C G A G       G G G G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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