The detailed information of tRNA gene sequence


Sequence ID>WENV180092705
Genome IDMPMF02277293
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1402
End posion on genome 1311
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tataagtatc
tRNA gene sequence 
GGTGGGGTGGCGGAGTTCGGCTGAACGCACCAGTCTTGAAAACTGGCAAGGGCGCAAGTC
CTTCGTGGGTTCAAATCCCACCCCCACCGCCA
Downstream region at tRNA end position 
aacctagttt
Secondary structure (Cloverleaf model)
>WENV180092705	Ser	TGA
                   c      GCCA aacctagttt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     A
  C         G G C G       G T G G G     C
  G           | | |                 T T
  G         A C G C
    C T G A        A     CAAGGGCGCAAGTCCTTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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