The detailed information of tRNA gene sequence


Sequence ID>WENV180092716
Genome IDMPMF02278185
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 815
End posion on genome 891
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
acttaacaaa
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTACACTCATAATGTATTGGTCCCAGGTTCGAA
TCCTGGCGGGCCCACCA
Downstream region at tRNA end position 
aactgacgaa
Secondary structure (Cloverleaf model)
>WENV180092716	Ile2	CAT
                   a      ACCA aactgacgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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