The detailed information of tRNA gene sequence


Sequence ID>WENV180092731
Genome IDMPMF02279229
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 89
End posion on genome 182
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aaataatttt
tRNA gene sequence 
GGGAATGATTAGGAGGCTGGTGCCCCTCGTGGTCTTCAAAACCATTGGGATCTACACAAT
AGATCCGGTGAGTTCGATTCTCACGCGTTCCCGCta
Downstream region at tRNA end position 
aaatgaaaac
Secondary structure (Cloverleaf model)
>WENV180092731	SeC	TCA
                   t      GCta aaatgaaaac
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     C A C T C     A
      C G G        T      | | | | |     G
    T       A G G A       G T G A G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGGGATCTACACAATAGATCCG
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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