The detailed information of tRNA gene sequence


Sequence ID>WENV180092734
Genome IDMPMF02279454
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1013
End posion on genome 921
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtactcaac
tRNA gene sequence 
GGAAAGGTGGGTGAGCTGGTTTAAACCAACGGGTTGCTAACTCGTCGTACGTCGAAAGAT
GTACCGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
ttatttgtat
Secondary structure (Cloverleaf model)
>WENV180092734	Ser	GCT
                   c      GCCA ttatttgtat
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTACGTCGAAAGATGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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