The detailed information of tRNA gene sequence


Sequence ID>WENV180092745
Genome IDMPMF02280106
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 51
End posion on genome 139
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatgaatatt
tRNA gene sequence 
GGAGAGGTGGCTCGAGTGGTTGAAGGCGGCTGTCTTGAAAACAGCTAAGGGGGAAACTCC
TTCGAGGGTTCGAATCCCTCCCTCTCCGCaa
Downstream region at tRNA end position 
atcgtaactt
Secondary structure (Cloverleaf model)
>WENV180092745	Ser	TGA
                   t      GCaa atcgtaactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T G A G        G      | | | | |     G
  G         C T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TAAGGGGGAAACTCCTTC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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