The detailed information of tRNA gene sequence


Sequence ID>WENV180092746
Genome IDMPMF02280111
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1050
End posion on genome 963
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taccacatcc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGCGGGTTTGCTAAATCCGTGACCGGGTAACTGGT
CCGCAGGTTCGAATCCTGTCCTCTCCGCtt
Downstream region at tRNA end position 
tggtttgaca
Secondary structure (Cloverleaf model)
>WENV180092746	Ser	GCT
                   c      GCtt tggtttgaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGACCGGGTAACTGGTCC
                    C - G
                    G - C
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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