The detailed information of tRNA gene sequence


Sequence ID>WENV180092781
Genome IDMPMF02281834
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 618
End posion on genome 545
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gttacattgt
tRNA gene sequence 
GGGGATTTAACTCAGTTGGTAGAGTATCTGCTTCGCAAGCAGGATGTCAACGGTTCGAGT
CCGTTAATCTCCACtc
Downstream region at tRNA end position 
tttactgcgg
Secondary structure (Cloverleaf model)
>WENV180092781	Ala	CGC
                   t      ACtc tttactgcgg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     T - A          T G
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C A       A A C G G     C
    G       | | | |                 T T
    G       G A G T
      T A          A     ATGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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