The detailed information of tRNA gene sequence


Sequence ID>WENV180092787
Genome IDMPMF02282180
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 569
End posion on genome 491
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tttaaggttt
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTCTAGCGTGCTTGACTGGGGGTCAAGTGGTCGGAGGTTCA
AATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
atttttcaat
Secondary structure (Cloverleaf model)
>WENV180092787	Pro	GGG
                   t      ACCA atttttcaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        G      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | +                 T T
  G         G C G T
    T C T A        G     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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