The detailed information of tRNA gene sequence


Sequence ID>WENV180092918
Genome IDMPMF02290250
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 552
End posion on genome 623
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tcacgtgcac
tRNA gene sequence 
GGGCTTGTAGCTCAATGGCAGAGCAGTCGGCTCATAACCGACCGGTTCCAGGTTCGAATC
CTGGCGGGCCCAtct
Downstream region at tRNA end position 
gcggtcgtct
Secondary structure (Cloverleaf model)
>WENV180092918	Ile2	CAT
                   c      Atct gcggtcgtct
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T + G
                     G - C          T A
                    T     G G T C C     A
        A A        A      | | | | |     G
      T     C T C G       C C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     CGGTT
                    G - C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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