The detailed information of tRNA gene sequence


Sequence ID>WENV180092930
Genome IDMPMF02290812
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 225
End posion on genome 149
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gaggggggcg
tRNA gene sequence 
GGGCCCGTAGCTCAACTGGTTAGAGCAGGCCGCTCATAACGGTCTGGTTGCAGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
ttatttcacc
Secondary structure (Cloverleaf model)
>WENV180092930	Ile2	CAT
                   g      ACCA ttatttcacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G - C
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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