The detailed information of tRNA gene sequence


Sequence ID>WENV180093003
Genome IDMPMF02294937
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 161
End posion on genome 72
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctatccccgc
tRNA gene sequence 
GGAGGGGTGACAGAGTGGTCGATTGTGCCGGTCTCGAAAACCGGTGTACCTTTGCAGGTA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ttatcacgtt
Secondary structure (Cloverleaf model)
>WENV180093003	Ser	CGA
                   c      GCCA ttatcacgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C A       G T G G G     C
    G       + | | |                 T T
    T       T T G T
      C G A        G     TGTACCTTTGCAGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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