The detailed information of tRNA gene sequence


Sequence ID>WENV180093028
Genome IDMPMF02296090
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 150
End posion on genome 61
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acctgtacgc
tRNA gene sequence 
GGAGATGTGCTGGAGTGGTTGAACAGGGCTGCCTGCTAAGCAGTTGTGCTGGAAACGGCA
CCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tccttttgcc
Secondary structure (Cloverleaf model)
>WENV180093028	Ser	GCT
                   c      GCCA tccttttgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T   C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G G G G G     C
    G         | | |                 T T
    T       A C A G
      T G A        G     TGTGCTGGAAACGGCACC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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