The detailed information of tRNA gene sequence


Sequence ID>WENV180093038
Genome IDMPMF02296673
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1382
End posion on genome 1470
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaagaccacT
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTGAAGGCGTCGGTCTTGAAAACCGAAGAGGTGTCAAAGCCT
CCGTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
caatcttgct
Secondary structure (Cloverleaf model)
>WENV180093038	Ser	TGA
                   T      GTtt caatcttgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T G A        G     AGAGGTGTCAAAGCCTCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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