The detailed information of tRNA gene sequence


Sequence ID>WENV180093054
Genome IDMPMF02298131
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 533
End posion on genome 444
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgacctgtgc
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCCGGTTTGCTAAACCGGTGAGGGGGAAACTCCT
CCCAGGGTTCGAATCCCTGCCTCACCGCCA
Downstream region at tRNA end position 
atatttatta
Secondary structure (Cloverleaf model)
>WENV180093054	Ser	GCT
                   c      GCCA atatttatta
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGAGGGGGAAACTCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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