The detailed information of tRNA gene sequence


Sequence ID>WENV180093056
Genome IDMPMF02298288
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 317
End posion on genome 243
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccccctcaa
tRNA gene sequence 
GGGCACGTAGCTCAGTGGGAGAGCGCATGCTTCACACGCATGAGGTCACAAGTTCAATCC
TTGTCGTGCCCACCA
Downstream region at tRNA end position 
atttgatcaa
Secondary structure (Cloverleaf model)
>WENV180093056	Val	CAC
                   a      ACCA atttgatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T G T T C     A
        G A        A      | | | | |     A
      T     C T C G       A C A A G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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