The detailed information of tRNA gene sequence


Sequence ID>WENV180093066
Genome IDMPMF02298733
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1095
End posion on genome 1003
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATGCGGTTTAACACC
GTATCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ataacagaga
Secondary structure (Cloverleaf model)
>WENV180093066	Ser	GCT
                   n      GCCA ataacagaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGTTTAACACCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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