The detailed information of tRNA gene sequence


Sequence ID>WENV180093105
Genome IDMPMF02300907
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 13238
End posion on genome 13162
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gctttaggag
tRNA gene sequence 
GGGGCGTTAGCTCAGCTGGCTAGAGCGCCGTACTCACACCGCGGAGGTCACTGGTTCGAG
TCCAGTACGCCCCACCA
Downstream region at tRNA end position 
ttccagcgat
Secondary structure (Cloverleaf model)
>WENV180093105	Val	CAC
                   g      ACCA ttccagcgat
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    A   C
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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