The detailed information of tRNA gene sequence


Sequence ID>WENV180093151
Genome IDMPMF02303543
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 50
End posion on genome 137
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttgatattt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCACGCTTGGAAAGCGTGTGTGCGTTTACGCGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCtc
Downstream region at tRNA end position 
tcataagccc
Secondary structure (Cloverleaf model)
>WENV180093151	Ser	GGA
                   t      GCtc tcataagccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTGCGTTTACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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