The detailed information of tRNA gene sequence


Sequence ID>WENV180093154
Genome IDMPMF02303817
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 415
End posion on genome 503
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgggtcgaT
tRNA gene sequence 
GGAGATGTGGTCGAGTGGTTGATGGCTCTGGTCTTGAAAACCAGCATGTCCGCAAGGGCA
TCGTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
ttatttctat
Secondary structure (Cloverleaf model)
>WENV180093154	Ser	TGA
                   T      GTtt ttatttctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T   C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G       + | + |                 T T
    T       T G G C
      T G A        T     CATGTCCGCAAGGGCATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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