The detailed information of tRNA gene sequence


Sequence ID>WENV180093156
Genome IDMPMF02303970
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 507
End posion on genome 417
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgagtcccc
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCTGAAGGGGCACGCCTGGAAAGCGTGTGTGCGGTACTCCCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttcggtacag
Secondary structure (Cloverleaf model)
>WENV180093156	Ser	GGA
                   c      GCCA ttcggtacag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TGTGCGGTACTCCCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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