The detailed information of tRNA gene sequence


Sequence ID>WENV180093181
Genome IDMPMF02305464
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 72257
End posion on genome 72352
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaagtgccat
tRNA gene sequence 
GGAAGCGAACGGGGCCCGGTGGCCCTCCCGGTCTTCAAAATCGGTCGCTCCCCGCTCTGC
GGGGGGGCTGGGTTCGACTCCCAGGCGCTTCCGCCA
Downstream region at tRNA end position 
taacttgttc
Secondary structure (Cloverleaf model)
>WENV180093181	SeC	TCA
                   t      GCCA taacttgttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T C
                    A     G A C C C     A
      C C C        C      | | | | |     G
    G       G G G G       C T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TCGCTCCCCGCTCTGCGGGGGGG
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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