The detailed information of tRNA gene sequence


Sequence ID>WENV180093197
Genome IDMPMF02306359
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1690
End posion on genome 1599
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gattcctccc
tRNA gene sequence 
GGAGGGATGGCCGAGCGGACGAAGGCGGCAGTCTTGAAAACTGTTGAGCCGGTTTTGCCG
GGTCCGTGGGTTCGAATCCCACTCCCTCCGCCg
Downstream region at tRNA end position 
gagtcagatc
Secondary structure (Cloverleaf model)
>WENV180093197	Ser	TGA
                   c      GCCg gagtcagatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TGAGCCGGTTTTGCCGGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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