The detailed information of tRNA gene sequence


Sequence ID>WENV180093228
Genome IDMPMF02308005
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 17914
End posion on genome 17990
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ccgttcattg
tRNA gene sequence 
GGGCCCATAGCTCAATTGGCTAGAGCTTCCGGCTCATAACCGGATGGTTCCAGGTTCAAT
TCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
ttttcatgct
Secondary structure (Cloverleaf model)
>WENV180093228	Ile2	CAT
                   g      ACCA ttttcatgct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G G T C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        T     TGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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