The detailed information of tRNA gene sequence


Sequence ID>WENV180093229
Genome IDMPMF02308005
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 31629
End posion on genome 31540
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctgattatt
tRNA gene sequence 
GGAGAGGTGACCGAGCGGTTGAAGGTGCACGCCTGGAAAGCGTGTGTGTGGGAAACTGCA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaatctagg
Secondary structure (Cloverleaf model)
>WENV180093229	Ser	GGA
                   t      GCCA aaaatctagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TGTGTGGGAAACTGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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