The detailed information of tRNA gene sequence


Sequence ID>WENV180093234
Genome IDMPMF02308184
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4806
End posion on genome 4731
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgggcgccgg
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATC
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
gtttgtttcg
Secondary structure (Cloverleaf model)
>WENV180093234	Trp	CCA
                   g      GCCA gtttgtttcg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          C T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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